Trans-meQTLs across different cancer types

In trans-meQTL analyses, we identified 965,050 trans-meQTLs at FDR < 0.05 and |r|>=0.3 in 23 cancer types for users to search or browse.

     

e.g., "BLCA"
e.g., "rs4975682"
e.g., "cg25599786"
e.g., "PDCD6"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Methylation probe
Methylation position (hg19)
Gene symbol
Beta
t-stat
r
p-valule
Display
BLCA rs73484568 chr9:33132492 G/A cg04842962 chr6:43655489 MRPS18A 1.05 26.95 0.81 3.21E-90 Box Plot
BLCA rs73484568 chr9:33132492 G/A cg20290983 chr6:43655470 MRPS18A 1.06 26.84 0.81 9.09E-90 Box Plot
BLCA rs7612322 chr3:125765800 A/G cg26321609 chr3:123680480 CCDC14 1.15 25.96 0.8 3.47E-86 Box Plot
BLCA rs7633958 chr3:125741256 C/T cg26321609 chr3:123680480 CCDC14 -1.18 -26.98 -0.81 2.53E-90 Box Plot
BLCA rs7634120 chr3:125741230 G/A cg26321609 chr3:123680480 CCDC14 -1.18 -26.98 -0.81 2.53E-90 Box Plot
BLCA rs7634234 chr3:125741352 G/A cg26321609 chr3:123680480 CCDC14 -1.16 -24.23 -0.78 4.43E-79 Box Plot
BLCA rs7645814 chr3:125741333 T/C cg26321609 chr3:123680480 CCDC14 -1.18 -26.98 -0.81 2.53E-90 Box Plot
BLCA rs7646705 chr3:125745433 C/T cg26321609 chr3:123680480 CCDC14 -1.16 -24.23 -0.78 4.43E-79 Box Plot
BLCA rs7647107 chr3:125739717 G/T cg26321609 chr3:123680480 CCDC14 1.13 25.24 0.79 2.87E-83 Box Plot
BLCA rs7755710 chr6:66783355 G/A cg15611600 chr13:45563400 KIAA1704;NUFIP1 -1.08 -24.89 -0.79 8.15E-82 Box Plot
BLCA rs7776413 chr6:66783241 A/G cg15611600 chr13:45563400 KIAA1704;NUFIP1 -1.08 -25.18 -0.79 5.38E-83 Box Plot
BLCA rs7864705 chr9:33140352 A/C cg04842962 chr6:43655489 MRPS18A 1.06 27.09 0.81 9.56E-91 Box Plot
BLCA rs7864705 chr9:33140352 A/C cg20290983 chr6:43655470 MRPS18A 1.06 26.6 0.81 8.93E-89 Box Plot
BLCA rs7865745 chr9:33140976 A/G cg04842962 chr6:43655489 MRPS18A -1.07 -28.16 -0.82 4.68E-95 Box Plot
BLCA rs7865745 chr9:33140976 A/G cg20290983 chr6:43655470 MRPS18A -1.07 -27.54 -0.82 1.38E-92 Box Plot